Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946985.1_cds_XP_016488890.1_79472
CDS Infomation

[gene=LOC107808840] [db_xref=GeneID:107808840] [protein=putative UDP-rhamnose:rhamnosyltransferase 1] [protein_id=XP_016488890.1] [location=27737..29134] [gbkey=CDS]
Sequence

ATGAGAAAGAATGATGTTCATGTAGTAATGCTACCCTGGTCTGCATTTGGTCACCTTATT
CCATTTTTCAATTTCTCCATAGCCTTAGCCAAGGTAGGAGGAGTTCATGTATCATTCATA
TCTACTCCCAAGAATATCAAAAGACTCCCTAAAGTTCCTACTAACTTGACACACCTTGTG
AAATTAGTGGAATTTCCATTGCCAACTCTTGACGACAAGAGTCTTTTGCCTGAAGATGCT
GAAGCTTCTGTTGATCTTCCTTTAGAAAAAATCCAGTACTTGAAAGCAGCTTATGATCTG
CTCCAAGAACCCATCAAACAATTCATTGCAGATAAAAAGCCTGATTGGATTATTGTCGAC
TTCTTCCAATATTGGATAGTTGAGATTGCTGAAGCTTATGACATCCCTATGATTCACCTC
AGTATTTTTTCAGCTGCTTCAAGAGCTTTCTTGATTGCAGCAAGAGCTTCAGGACCGATT
CCTGAATGTCTCACCTCACCTGTTTCTGAGAAGCTGGAATTTTCATCAACTTTGGCTTAC
CGGAGTTATGAAGCATTAGAGCTTTTCTCCTCATCTTTCCTTGAAGACGCCTCAGGGTTA
TCCTACGCTCAACGCTCAGCTAAAATATTGAGTACATGTCGAGCTATGGCTATACGGAGT
TGCAAAGAATTCGAAGGTGATTACTTGGATGCGGTGCACAAACTCATCTCTAAGCCTACT
ATTCCGGTTGGATTACTACCACCTGAAACATCATCACTAGGAGGAGAAAACTTCAATGGT
GATCAATCGTGGCAGAGAATCTTCAAATGGCTTAATCAACAGAAGGCTGGGTCAGTTTTA
TTTGTGGGATTTGGAAGCGAGTGTAAACCTAGTAAATACCAAGTAGATGAAATAGCTTAC
GGGCTTGAGCTTTATGGGCTACCATTTATATGGATACTACAGAAGCCAAGTTGGAGTTCA
GATGAAGTGGATCCTTTGCCAGCAGGATTTGGGTTGACTACTGCAGAGAAAGGAGTGGTG
CACATTGGATGGGCCCCACAGAAGGAAATTCTGGCACATCCTTGTATTGGGGGTACTCTA
ACCCAAGCAGGCCTAAGTTCTACCGTAGAAACTCTACAGCATGGGCATGTTCTTGTTGTT
CTGCCATTTGTGTATGATCAGGGGTTGAATGCAAGATTGTTAGTGGAAAAAGGAATGGCA
ATTGAAGTAAAGAGAAAGGAAGAAAACGGGTCATTTACTAGAAAGGAGATAGCCAAGGCA
TTGACGTACGCCATGGTTTCTGAAGACGGTGAAAAGCTTAGAGCTAGAGCAAGAGAAGCT
GCTGCCATATTTGGAGATAGACAGCTTCATGATTCTTACATTGCTAGCTTTGTTGAGTAT
CTGAAAAATAAGGAGTAG

Peptide Sequence

PEP ID

XP_016488890.1
PEP Infomation

PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tabacum]
Sequence

MRKNDVHVVMLPWSAFGHLIPFFNFSIALAKVGGVHVSFISTPKNIKRLPKVPTNLTHLV
KLVEFPLPTLDDKSLLPEDAEASVDLPLEKIQYLKAAYDLLQEPIKQFIADKKPDWIIVD
FFQYWIVEIAEAYDIPMIHLSIFSAASRAFLIAARASGPIPECLTSPVSEKLEFSSTLAY
RSYEALELFSSSFLEDASGLSYAQRSAKILSTCRAMAIRSCKEFEGDYLDAVHKLISKPT
IPVGLLPPETSSLGGENFNGDQSWQRIFKWLNQQKAGSVLFVGFGSECKPSKYQVDEIAY
GLELYGLPFIWILQKPSWSSDEVDPLPAGFGLTTAEKGVVHIGWAPQKEILAHPCIGGTL
TQAGLSSTVETLQHGHVLVVLPFVYDQGLNARLLVEKGMAIEVKRKEENGSFTRKEIAKA
LTYAMVSEDGEKLRARAREAAAIFGDRQLHDSYIASFVEYLKNKE

Transcript Sequence

Gene sequence data has not been registered.